Page III: View gene by gene:
Sequence: Rhizobium etli CFN 42 plasmid p42a, complete sequence.
Kingdom: Bacteria, Group: Alphaproteobacteria, Genetic code: 11
Species GenBank RefSeq Size (bp) G+C% PubMed Shape
Rhizobium etli CFN 42 CP000134 NC_007762 194,229 circular
Compare to RefSeq # of genes Detail Category
Exact match 105 list
Different start 56 list
Novel genes 82 (12)Learn more list
Not confirmed genes 14 (4)Learn more list

All predictions:
Tools legend: SD - Seq DNA; SP - Seq Pro; BD - BLAST DNA; BP - BLAST Pro; GB - GenBank Record
IndexStrand Left EndRight Endbp ClassLearn more Cat.Tools
1+12072072New genes SD SP BD BP;
2+30212589571Exact Match with Annotation SD SP BD BP; GB
3-1339255312151Different 5' with Annotation SD SP BD BP; GB
4+28112909991New genes SD SP BD BP;
5+303633232881New genes SD SP BD BP;
6+3320472614071Exact Match with Annotation SD SP BD BP; GB
7+4723580510831Exact Match with Annotation SD SP BD BP; GB
8+580264556541Exact Match with Annotation SD SP BD BP; GB
9+6480764011611Exact Match with Annotation SD SP BD BP; GB
10-7634935817251Different 5' with Annotation SD SP BD BP; GB
11-93559426721New genes SD SP BD BP;
12-10044107817381Exact Match with Annotation SD SP BD BP; GB
13-107931231915271Exact Match with Annotation SD SP BD BP; GB
14-12688135728851Exact Match with Annotation SD SP BD BP; GB
15-13666137731081New genes SD SP BD BP;
16-13932142072761New genes SD SP BD BP;
17-14215152019871Exact Match with Annotation SD SP BD BP; GB
18-15202157085072Exact Match with Annotation SD SP BD BP; GB
19-15776159131381New genes SD SP BD BP;
20-15916161282131New genes SD SP BD BP;
21-162931783715452Exact Match with Annotation SD SP BD BP; GB
22-17841182724322Different 5' with Annotation SD SP BD BP; GB
23-18326189436182Exact Match with Annotation SD SP BD BP; GB
24-18940192453061Exact Match with Annotation SD SP BD BP; GB
25-196202123616171Different 5' with Annotation SD SP BD BP; GB
26+21380216102311New genes SD SP BD BP;
27+2169521757631New genes SD SP BD BP;
28-21754220202671New genes SD SP BD BP;
29-22105222751711Exact Match with Annotation SD SP BD BP; GB
30-222812377114911Exact Match with Annotation SD SP BD BP; GB
31-23982249479661Different 5' with Annotation SD SP BD BP; GB
32+251022645413531Different 5' with Annotation SD SP BD BP; GB
33+26458272287711Exact Match with Annotation SD SP BD BP; GB
34+27294282239301Exact Match with Annotation SD SP BD BP; GB
35+28292290267351Exact Match with Annotation SD SP BD BP; GB
36-29050292982491New genes SD SP BD BP;
37+29348301457981Different 5' with Annotation SD SP BD BP; GB
38+302193226720491Exact Match with Annotation SD SP BD BP; GB
39-32317325592431New genes SD SP BD BP;
40+32697331884921Different 5' with Annotation SD SP BD BP; GB
41+33215333671531New genes SD SP BD BP;
42-33405336292251New genes SD SP BD BP;
43-33640339453061Exact Match with Annotation SD SP BD BP; GB
44-34023348538312Different 5' with Annotation SD SP BD BP; GB
45-34930351632341Different 5' with Annotation SD SP BD BP; GB
46-35160353782191New genes SD SP BD BP;
47-35392357934022Exact Match with Annotation SD SP BD BP; GB
48+359613716912091Exact Match with Annotation SD SP BD BP; GB
49+37169378376691Exact Match with Annotation SD SP BD BP; GB
50+37834380702371New genes SD SP BD BP;
51+385213971111911Different 5' with Annotation SD SP BD BP; GB
52-39727399031771New genes SD SP BD BP;
53-40055403933391New genes SD SP BD BP;
54+40433406512191Exact Match with Annotation SD SP BD BP; GB
55+40648409322852New genes SD SP BD BP;
56+41124413151921New genes SD SP BD BP;
57+412934337720851Exact Match with Annotation SD SP BD BP; GB
58+43385438374532Different 5' with Annotation SD SP BD BP; GB
59+43910445216121Exact Match with Annotation SD SP BD BP; GB
60-44866451262611Different 5' with Annotation SD SP BD BP; GB
61+451794768925111Exact Match with Annotation SD SP BD BP; GB
62+47889486267381Exact Match with Annotation SD SP BD BP; GB
63+48733490923601Different 5' with Annotation SD SP BD BP; GB
64+490925146123701Exact Match with Annotation SD SP BD BP; GB
65+51568521405731Different 5' with Annotation SD SP BD BP; GB
66+52230531268971Different 5' with Annotation SD SP BD BP; GB
67+53250540237741Exact Match with Annotation SD SP BD BP; GB
68+54020549018821Exact Match with Annotation SD SP BD BP; GB
69+548985600111041Exact Match with Annotation SD SP BD BP; GB
70+560425707610351Exact Match with Annotation SD SP BD BP; GB
71+57174579147411Exact Match with Annotation SD SP BD BP; GB
72-57996586136181Exact Match with Annotation SD SP BD BP; GB
73-58616593116961Exact Match with Annotation SD SP BD BP; GB
74+60204609477441Exact Match with Annotation SD SP BD BP; GB
75+612226228910681New genes SD SP BD BP;
76+62300624221231New genes SD SP BD BP;
77-62491626821921New genes SD SP BD BP;
78-63312637974861Different 5' with Annotation SD SP BD BP; GB
79+64327645241981Exact Match with Annotation SD SP BD BP; GB
80+645286619516681Exact Match with Annotation SD SP BD BP; GB
81+663756821618421Different 5' with Annotation SD SP BD BP; GB
82-68248684932461New genes SD SP BD BP;
83+68476687062311New genes SD SP BD BP;
84+68731689522221New genes SD SP BD BP;
85-69088694773901Exact Match with Annotation SD SP BD BP; GB
86+69562699603991New genes SD SP BD BP;
87+6995770034781New genes SD SP BD BP;
88+700317117311431Exact Match with Annotation SD SP BD BP; GB
89+71647721054591Different 5' with Annotation SD SP BD BP; GB
90+721337337712451Exact Match with Annotation SD SP BD BP; GB
91+73399741007021New genes SD SP BD BP;
92+741657527411101New genes SD SP BD BP;
93+754027727918781Different 5' with Annotation SD SP BD BP; GB
94+77444776351922New genes SD SP BD BP;
95-777047884911461Different 5' with Annotation SD SP BD BP; GB
96-78839790181801New genes SD SP BD BP;
97+79017791961801New genes SD SP BD BP;
98-79175794112371New genes SD SP BD BP;
99+79432802508191Exact Match with Annotation SD SP BD BP; GB
100+80247811288821Exact Match with Annotation SD SP BD BP; GB
101+81326817123871Different 5' with Annotation SD SP BD BP; GB
102+81699819472491New genes SD SP BD BP;
103+81931822843541New genes SD SP BD BP;
104+82545826971531New genes SD SP BD BP;
105+82719828351171New genes SD SP BD BP;
106+83194834632702New genes SD SP BD BP;
107+84667848371711New genes SD SP BD BP;
108+85469856331651New genes SD SP BD BP;
109+86385868344501Different 5' with Annotation SD SP BD BP; GB
110-86869877508821Exact Match with Annotation SD SP BD BP; GB
111-87747885658191Exact Match with Annotation SD SP BD BP; GB
112+88586888222371New genes SD SP BD BP;
113-88801889801801New genes SD SP BD BP;
114+88979893293511Exact Match with Annotation SD SP BD BP; GB
115+8932989418901New genes SD SP BD BP;
116+89415899455311Different 5' with Annotation SD SP BD BP; GB
117+90837911993631Exact Match with Annotation SD SP BD BP; GB
118+91196915433481Exact Match with Annotation SD SP BD BP; GB
119+916169318115661Exact Match with Annotation SD SP BD BP; GB
120+93166934863211Different 5' with Annotation SD SP BD BP; GB
121+93543943377951New genes SD SP BD BP;
122+964729771912482Different 5' with Annotation SD SP BD BP; GB
123+981149927111582Different 5' with Annotation SD SP BD BP; GB
124+1000501001871382New genes SD SP BD BP;
125+1001801003531741New genes SD SP BD BP;
126+1012111014772671Different 5' with Annotation SD SP BD BP; GB
127+1015101023138041Exact Match with Annotation SD SP BD BP; GB
128+1025921033867951Different 5' with Annotation SD SP BD BP; GB
129-1033491043269781Different 5' with Annotation SD SP BD BP; GB
130-1044121049064951Different 5' with Annotation SD SP BD BP; GB
131-1048611054005401Exact Match with Annotation SD SP BD BP; GB
132+1056011065549542Exact Match with Annotation SD SP BD BP; GB
133-1068771070561801New genes SD SP BD BP;
134-1071211074413211Different 5' with Annotation SD SP BD BP; GB
135-10742610899115661Exact Match with Annotation SD SP BD BP; GB
136-1090641094113481Exact Match with Annotation SD SP BD BP; GB
137-1094081097703631Exact Match with Annotation SD SP BD BP; GB
138-1098601099761171New genes SD SP BD BP;
139-10997611161016351Exact Match with Annotation SD SP BD BP; GB
140-1115861119633781Different 5' with Annotation SD SP BD BP; GB
141+1120561122802251New genes SD SP BD BP;
142+1123981126402431New genes SD SP BD BP;
143-1126341127501171New genes SD SP BD BP;
144+11294211484018991Exact Match with Annotation SD SP BD BP; GB
145-1152401157314921Exact Match with Annotation SD SP BD BP; GB
146-1160181162512341Exact Match with Annotation SD SP BD BP; GB
147-1162601167484891Different 5' with Annotation SD SP BD BP; GB
148+1168051173145101Exact Match with Annotation SD SP BD BP; GB
149-1174141175871741New genes SD SP BD BP;
150-1177351186409061Exact Match with Annotation SD SP BD BP; GB
151+1188891192543661Exact Match with Annotation SD SP BD BP; GB
152-1192611194371771New genes SD SP BD BP;
153+1199181202263091Exact Match with Annotation SD SP BD BP; GB
154+1205491207131651Different 5' with Annotation SD SP BD BP; GB
155+1210421215334921New genes SD SP BD BP;
156-1215141216601471New genes SD SP BD BP;
157-1217251220543301Exact Match with Annotation SD SP BD BP; GB
158+1221711224372671New genes SD SP BD BP;
159-12254212373511941Different 5' with Annotation SD SP BD BP; GB
160+1245801250895101New genes SD SP BD BP;
161-1251431252771351New genes SD SP BD BP;
162+1253231257274051Different 5' with Annotation SD SP BD BP; GB
163+12666212781911582Exact Match with Annotation SD SP BD BP; GB
164-12836312991615542Exact Match with Annotation SD SP BD BP; GB
165+1305801307381591New genes SD SP BD BP;
166-1307351310763421Exact Match with Annotation SD SP BD BP; GB
167-1313141314991861New genes SD SP BD BP;
168-1315931320244321Different 5' with Annotation SD SP BD BP; GB
169+13202313408620641Exact Match with Annotation SD SP BD BP; GB
170-1340981343732761New genes SD SP BD BP;
171+13445213571112601Exact Match with Annotation SD SP BD BP; GB
172-1359461365035581Exact Match with Annotation SD SP BD BP; GB
173-1364971367632671New genes SD SP BD BP;
174+1368301370061771New genes SD SP BD BP;
175+1370211374344141New genes SD SP BD BP;
176+1378831380892071New genes SD SP BD BP;
177+1382821386503691Exact Match with Annotation SD SP BD BP; GB
178+1386471388441982New genes SD SP BD BP;
179+1388551393344801Different 5' with Annotation SD SP BD BP; GB
180+1397281402345071Exact Match with Annotation SD SP BD BP; GB
181-1402281410468191Exact Match with Annotation SD SP BD BP; GB
182+1412551415062521Different 5' with Annotation SD SP BD BP; GB
183+1415031416251231New genes SD SP BD BP;
184-1417371421564201Different 5' with Annotation SD SP BD BP; GB
185-1422831429096271New genes SD SP BD BP;
186+1428781431682911New genes SD SP BD BP;
187-1433321434691381New genes SD SP BD BP;
188+1435491438573091Exact Match with Annotation SD SP BD BP; GB
189+1440501445024531Exact Match with Annotation SD SP BD BP; GB
190+1446881448371501New genes SD SP BD BP;
191-1455921457771861New genes SD SP BD BP;
192+14621814759113741Exact Match with Annotation SD SP BD BP; GB
193-1476171477751591New genes SD SP BD BP;
194-14792714909311671Exact Match with Annotation SD SP BD BP; GB
195+1498571500331771New genes SD SP BD BP;
196+1500511502331831New genes SD SP BD BP;
197+15023015126110321Exact Match with Annotation SD SP BD BP; GB
198+1512871519316451Different 5' with Annotation SD SP BD BP; GB
199+15205115717751271Different 5' with Annotation SD SP BD BP; GB
200+15774415948617431Exact Match with Annotation SD SP BD BP; GB
201+1595661600574921Different 5' with Annotation SD SP BD BP; GB
202+1600541609388851Exact Match with Annotation SD SP BD BP; GB
203+1609381612943571Different 5' with Annotation SD SP BD BP; GB
204+1612911616984081Exact Match with Annotation SD SP BD BP; GB
205+1617731620272551New genes SD SP BD BP;
206+1620241626536301Different 5' with Annotation SD SP BD BP; GB
207+16273316387511431Different 5' with Annotation SD SP BD BP; GB
208-1638811640571771New genes SD SP BD BP;
209-1642391643731351New genes SD SP BD BP;
210+1643851648464621Different 5' with Annotation SD SP BD BP; GB
211+1651691653331651Different 5' with Annotation SD SP BD BP; GB
212+1656701661614921Exact Match with Annotation SD SP BD BP; GB
213+1664941666671741New genes SD SP BD BP;
214-1667011669582581Different 5' with Annotation SD SP BD BP; GB
215-1671551677335791Exact Match with Annotation SD SP BD BP; GB
216-16797716995319771Different 5' with Annotation SD SP BD BP; GB
217-1699461701852401Different 5' with Annotation SD SP BD BP; GB
218-1701661704622971Exact Match with Annotation SD SP BD BP; GB
219+17072117403233121Exact Match with Annotation SD SP BD BP; GB
220+1740291745955671Exact Match with Annotation SD SP BD BP; GB
221+17458517574811641Exact Match with Annotation SD SP BD BP; GB
222+1757661763806151Exact Match with Annotation SD SP BD BP; GB
223-1763981767753781Exact Match with Annotation SD SP BD BP; GB
224-1767721774046331Exact Match with Annotation SD SP BD BP; GB
225-1775081777292221Exact Match with Annotation SD SP BD BP; GB
226+1779581782783211Exact Match with Annotation SD SP BD BP; GB
227-1782821789867051Different 5' with Annotation SD SP BD BP; GB
228-1790661798067411Different 5' with Annotation SD SP BD BP; GB
229-17997018127713081Exact Match with Annotation SD SP BD BP; GB
230-1812901817274381Exact Match with Annotation SD SP BD BP; GB
231-1817311825438131Exact Match with Annotation SD SP BD BP; GB
232-1825611832236631Exact Match with Annotation SD SP BD BP; GB
233-18324818442311761Different 5' with Annotation SD SP BD BP; GB
234-1844171846172011New genes SD SP BD BP;
235-1846141854178041Exact Match with Annotation SD SP BD BP; GB
236-18538918784524571Exact Match with Annotation SD SP BD BP; GB
237-1878551881543001Exact Match with Annotation SD SP BD BP; GB
238-1881471885303841Exact Match with Annotation SD SP BD BP; GB
239-1885201894979781Exact Match with Annotation SD SP BD BP; GB
240-1895081901316241Exact Match with Annotation SD SP BD BP; GB
241+19050519172212181Exact Match with Annotation SD SP BD BP; GB
242+19182319283010081Exact Match with Annotation SD SP BD BP; GB
243+19306019422911701Different 5' with Annotation SD SP BD BP; GB
 
Not confirmed genes annotated in RefSeq:
1+1589316207314
2+4075441293539
3+5315653323167
4+6258363113530
5-8530785624317
6-9336394322959
7+100326100631305
8-112019112426407
9-119110119757647
10-124223125143920
11+130879131241362
12-136895137203308
13+157307157753446
14-163928164548620