GeneMark.hmm for Prokaryotes (Version 2.4) (Reload this page)
Reference:Lukashin A. and Borodovsky M., GeneMark.hmm: new solutions for gene finding, NAR, 1998, Vol. 26, No. 4, pp. 1107-1115.
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1) This page has been updated to run version 2.4 of GeneMark.hmm, as well as version 2.5 of GeneMark.
2) Processing speed: 1 million nucleotides in 15 seconds.
3) Prediction results for sequences longer than 5 MB are sent by e-mail.
UPDATE (November 8, 2005):
Prediction models have been pre-computed for a 265 completely sequenced prokaryotic genomes from the NCBI RefSeq database.
Gene predictions made for these genomes are available in the GeneMark prokaryotic database.


Input Sequence
Title (optional):

Sequence Text:

Sequence File upload:

Species:

Use RBS model, if available
 
Output Options
E-Mail Address (required for graphical output or sequences longer than 5000000 bp)


Generate PDF graphics (screen)
Generate PostScript graphics (email)
Print GeneMark 2.4 predictions in addition to GeneMark.hmm predictions
Translate predicted genes into proteins
Sequences of predicted genes

Run

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