Thursday, November 13, 2003 |
17:00 - 20:00 |
Registration |
20:00 - 22:00 |
Reception
Georgia Tech Hotel and Conference Center, Conference Room A (2nd floor) |
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Friday, November 14, 2003 |
7:00 - 8:00 |
Continental Breakfast |
7:30 - 9:30 |
Registration (continued) |
Session 1
(8:00 - 9:40) |
Chair: Mark Borodovsky (Georgia Tech) |
8:00 - 8:20 |
John McDonald (University of Georgia)
Welcome & Introduction
|
8:20 - 9:00 |
John Tyson (Virginia Polytechnic)
Computational Cell Biology: From Molecular Networks to Cell Physiology
|
9:00 - 9:40 |
Adam Arkin, (University of California,
Berkeley)
Playing Practical Games with Bacteria and Viruses.
Exploring the Molecular Mechanisms behind Clever Cellular Stratagems
|
9:40 - 10:00 |
Break (Break Area, 2nd Floor) |
Session 2
(10:00 - 12:40) |
Chair: Andrey Rzhetsky (Columbia University) |
Keynote Talk
10:00 - 11:00 |
Laszlo Barabasi (University of Notre Dame)
The Architecture of Complexity: Structure and Modularity in Cellular
Networks |
| 11:00 - 11:20 |
Break (Break Area, 2nd Floor) |
| 11:20 - 12:00 |
M. Elizabeth Halloran (Emory University)
Graph Theory and Community Structure in Infectious Disease Models
|
12:00 - 12:40 |
Michael Gelfand
(State Scientific Center "GosNIIGenetica")
Riboswitches: Possibly the Oldest Regulatory System |
12:40 - 14:00 |
Lunch (Conference Dining Room) |
Session 3
(14:00 - 15:20) |
Chair: John Logsdon (University of Iowa) |
14:00 - 14:40 |
Richard Solé
(Universitat Pompeu Fabra)
Emergence and Selection in Genome Evolution |
14:40 - 15:20 |
Eugene Koonin (NCBI, NIH)
Simple Stochastic Birth and Death Models of Genome Evolution:
Was There Enough Time for Us to Evolve?
|
15:20 - 15:50 |
Break (Break Area, 2nd Floor) |
Session 4
(15:50 - 17:00) |
Chair: Ying Xu (University of Georgia) |
15:50 - 16:30 |
Andrey Rzhetsky
(Columbia University)
On Truth, Pathways and Interactions |
16:30 - 17:10 |
Sergei Maslov
(Brookhaven National Laboratory)
Detecting Topological Patterns in Protein Networks |
17:10 - 17:30 |
Break (Break Area, 2nd Floor) |
Poster Session
(17:30 - 20:00) |
The authors of posters with odd numbers are expected to be near their posters from 18:00 to 19:00
The authors of posters with even numbers are expected to be near their posters from 19:00 to 20:00 |
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Saturday, November 15, 2003 |
7:00 - 8:00 |
Continental Breakfast |
8:00 - 10:00 |
Registration (continued) |
Session 5
(8:00 - 9:40) |
Chair: Steve Harvey (Georgia Tech) |
8:00 - 8:30* |
Roland Krause
(Cellzome)
A Comprehensive Set of Protein Complexes by Cluster Analysis
of High Throughput Biochemical Purifications in Yeast |
8:30 - 9:00* |
Leonid Mirny (Massachusetts
Institute of Technology)
Protein Complexes and Functional Modules in Molecular Networks
|
| 9:00 - 9:40 |
Kevin White (Yale University)
Building Developmental Networks Genome-wide in Drosophila
|
9:40 - 10:00 |
Break (Break Area, 2nd Floor) |
Session 6
(10:00 - 12:40) |
Chair: Eberhard Voit (Medical University of South Carolina) |
Keynote Talk
10:00 - 11:00 |
Michael Savageau
(University of California, Davis)
Function, Design, and Construction of Gene Circuitry |
11:00 - 11:20 |
Break (Break Area, 2nd Floor) |
11:20 - 12:00 |
Dennis Vitkup
(Harvard University)
The Optimality, Expression, and Robustness of Cellular Metabolic
Networks |
12:00 - 12:40 |
Andreas Wagner
(University of New Mexico)
The large-scale structure of genetic networks: design, history,
or (mere) chemistry? |
12:40 - 14:10 |
Lunch (Conference Dining Room) |
Session 7
(14:10 - 15:30) |
Chair: Jun Liu (Harvard University) |
14:10 - 14:50 |
Harmen Bussemaker
(Columbia University)
Integrative Modeling of mRNA Expression and Transcription Factor
Binding Data |
14:50 - 15:30 |
Greg Dewey (Keck
Graduate Institute)
Network Analysis of Gene Expression Time Series |
15:30 - 15:50 |
Break (Break Area, 2nd Floor) |
Session 8
(15:50 - 17:10) |
Chair: Igor Zhulin (Georgia Tech) |
15:50 - 16:30 |
Eric Sonnhammer
(Karolinska Institutet)
Orthologous protein domains in eukaryotes |
16:30 - 17:10 |
Jun Liu (Harvard
University)
BPPS: An algorithm for analyzing protein sequence alignments
|
17:10 - 17:30 |
Break (Break Area, 2nd Floor) |
Poster Session
(17:30 - 20:00) |
The authors of posters with odd numbers are expected to be near their posters from 18:00 to 19:00
The authors of posters with even numbers are expected to be near their posters from 19:00 to 20:00 |
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Sunday, November 16, 2003 |
7:00 - 8:00 |
Continental Breakfast |
Session 9
(8:00 - 9:10) |
Chair: Eileen Kraemer (University of Georgia) |
8:00 - 8:40 |
Shmuel Pietrokovski
(Weizmann Institute of Science)
Conserved Networks of Interactions Within Protein Structures.
|
8:40 - 9:10* |
Joel Bader (John
Hopkins University)
A Genome-scale Protein Interaction Map for Drosophila melanogaster
|
9:10 - 9:30 |
Break (Break Area, 2nd Floor) |
Session 10
(9:30 - 11:45) |
Chair: Eugene Koonin (NCBI, NIH) |
Keynote Talk
9:30 - 10:30 |
Eugene Shakhnovich
(Harvard University)
Imprint of Evolution on Protein Structural Universe |
10:30 - 10:50 |
Break (Break Area, 2nd Floor) |
10:50 - 11:30 |
Martijn Huynen
(University of Nijmegen)
Scale-free, Small-world Interaction Networks:
Applications for Function Prediction and a Neutral Scenario for their
Evolution. |
11:30 - 11:45 |
Mark Borodovsky (Georgia Tech)
Concluding Remarks
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*Contributed talks |
